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Conventional PCR primers for the detection of grapevine pathogens disseminated by propagating material
69-80.Views:263Polymerase chain reaction driven by sequence specific primers has become the most widely used diagnostic method to detect and identify plant pathogens. The sensitive and cost-effective pathogen detection is exceptionally important in the production of propagating material. In this paper we have collected primer sequence data from the literature for the detection of the most important grapevine pathogens disseminated by propagating stocks by conventional polymerase chain reaction. Basic protocols to obtain template nucleic acids have also been briefly rewieved.
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Primers designed for the detection of grapevine pathogens spreading with propagating material by quantitative real-time PCR
21-30.Views:253Several grapevine pathogens are disseminated by propagating material as systemic, but latent infections. Their detection and identification have a basic importance in the production and handling of propagating stocks. Thus several sensitive and reliable diagnostic protocols mostly based on molecular techniques have been developed. Of these methods quantitative real-time PCR (q-PCR) has recently got an emerging importance. Here we collected primer data for the detection and identification of grapevine pathogens which are important in the production of propagating stocks by q-PCR. Additional novel techniques that use DNA amplification, hybridization and sequencing are also briefly reviewed.
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The KLP+ ("hat") trap, a non-sticky, attractant baited trap of novel design for catching the western corn rootworm (Diabrotiea v. virgifera) and cabbage flea beetles (Phyllotreta spp.) (Coleoptera: Chrysomelidae)
57-62.Views:221In the course of research aimed at the development of non-sticky, easy-to-use alternative trap designs for the capture of selected beetle pests, a newly designed "hat" trap, codenamed CSALOMON® KLP+, was compared with conventional trap designs. In the case of the western corn rootworm (WCR) Diabrotica v. virgifera (Coleoptera, Chrysomelidae) the new KLP+ traps baited with pheromonal or floral baits were equally sensitive as the former PAL or PALs sticky "cloak" designs, but the KLP+ traps catch capacity and selectivity was much higher. When baited with the floral WCR bait, the KLP+ trap proved to be more sensitive in capturing female \VCR, than the former sticky PALs trap design.
In capturing cabbage flea beetles (Phyllotreta spp., Coleoptera, Chrysomelidae), the new KLP+ trap design baited with allyl isothiocyanate performed better than the previously used VARL+ funnel traps in all respects studied.
In conclusion, the new KLP+ trap design, baited with the respective attractants, appears to be advantageous to use for the trapping of both WCR and cabbage flea beetles, and can be recommended for use as a trapping tool in plant protection practice in the detection and monitoring of these pest Coleoptera.
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Virus and virus-like diseases of grapevine in Hungary
25-36.Views:255Viruses and viroids are submicroscopic infectious particles which can cause disease symptoms on grapevine. These parasites are depending completely on the energy metabolism of the plant cell. To enter the host cell plant viruses depend on injuries or on transmission via invertebrates (insects, nematodes, etc.). Viruses are classified by many characters including particle morphology, host range and information content of the genome. At present about 70 viruses including 7 viroids infecting grapevine are known. In single or mixed infections they are potentially detrimental to the quality and quantity of grape production in any growing area of the world. Some viruses can cause severe economic damage in vineyards. In Hungary many important viruses and viroids have been detected in grape. This review summarises characteristics of viruses and the results of detection and characterization of virus and virus like diseases of grapevine in Hungary. The identification of the causal agent, its transmission, geographical distribution and the development of the diagnostic methods are also discussed.
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Detection and identification of phytoplasmas in peach based on woody indexing and molecular methods
35-41.Views:137Symptoms resembling phytoplasma disease have been observed on peach trees in a seed-source plantation of stone fruits in south Hungary quite recently. In this publication we report on the results of woody indexing of symptomatic peach trees on GF 305 indicator in the field and under greenhouse conditions as well as on molecular studies. Phytoplasma infection detected on GF 305 indicators in greenhouse and field indexing was confirmed by PCR. Nested PCR was conducted using universal primer pairs followed by group and subgroup specific primers for the second amplification. RFLP analysis of nested PCR products was performed using Rsal restriction enzyme. Based on the results of molecular studies it can be concluded that phytoplasmas, belonging to the European stone fruit yellows subgroup (16SrX-B) were identified in peach trees. Further studies on symptomatic peach trees originating from different parts of Hungary are in progress.
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Review of the self-incompatibility in apple (Malus x domestica Borkh., syn.: Malus pumila Mill.)
31-36.Views:508Apple (Malus x domestica Borkh.) is one of the most important fruit crops showing ribonuclease-mediated self-incompatibility, and no self-compatible apple cultivars are known. Twenty-nine S-alleles were identified in apple and many more incompatibility groups are present compared to sweet cherry. Results from a Belgian, English and a Japanese research group are combined and the S-genotypes of the most important world cultivars are collected. Two different allele labelling system are reconciled and detection methods used in case of the specific alleles are shown. Effects of the resistance breeding programmes are discussed; and scientific efforts involving transgenic technology to create self-compatible genotypes are shown. This review covers the most interesting issues regarding self-incompatibility in apple.
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Hyperspectral data in water stress detection
15-17.Views:173Remote sensing methods are applied widespread to investigate large land fields. Within these methods the status of certain vegetation can be determined based on the reflectance spectra of the chlorophyll, in order to support agriculture, forestry and the evaluation of soil pollution. The main aims of our study were to determine and validate the reflectance spectra of fruit tree species, in order to facilitate the identification and evaluation of stressed fruit trees in orchards.
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Application of DNA markers for detection of scab resistant apple cultivars and selections
59-63.Views:105A DNA marker-based study was undertaken to identify the occurrence of major scab resistance genes in some apple cultivars and selections of importance for apple breeding. Unfortunately none of the RAPD-based markers previously reported to detect the Va, Vb, Vr and Vx genes produced unambiguous results. By contrast, the CAPS marker MI8 produced the expected three bands in all cultivars and selections already known or suspected to have the Vf gene, as well as in the Russian cultivar 'Antonovka Polotora Funtovaja' suspected to have Va resistance which however may be allelic to Vf. Vf-carrying selections and newly named cultivars 'Frida' and 'Fredrik' are grown successfully in Sweden without fungicides, suggesting that the Vr resistance breaking scab races 6 and 7 have not yet become a problem. The SCAR marker B12 detected the Vm gene in 'Prairifire', 'Rouville', clones 'OR45T132' and 'OR48T70', and selection '16-36-193'. The SSR locus 0102b10 detected one band at 118 by in 'Reka'. This is presumed to be identical to the Vr gene marker previously reported.
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Determination of chlorophyll content in case of peach leaf curl disease (Taphrina deformans) with spectral analysis
49-52.Views:288One of the most important conditions of high quality fruit production is the early detection of hytopathologycal infections. The most dangerous disease of peach (Prunus persica) is the Taphrina deformans, which causes serious damages mainly in the years where the weather condition is cool and wet. In this study, healthy and naturally diseased leaves by peach leaf curl were investigated in the laboratory of University of Debrecen, CAAES, Institute of Water and Environmental Management. Both of hyperspectral measurement and the values of spectrophotometer shown the chlorophyll content of diseased leaves were lower than the healthy samples. Based on the experiments the water status of investigated leaves established the infected leaves contained more water in their tissues.
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Certification programme for production of virus-free propagating material of grapevine and its results in Hungary
39-43.Views:139In Hungary, detection of virus and virus-like diseases of grapevine began in 1960's at the Research Institute for Viticulture and Enology by János Lehoczky and his colleagues. At present, sixteen virus and virus-like diseases of Vitis vinifera are known to occur in Hungary.
Regular virological screening of grapevine varieties started in 1972. The present system of screening (visual selection, indexing, ELISA) has been established using methods with continuous improvement according to recommendations of international organizations.
In the first year symptomless grapevine plants are selected and marked during surveys carried out twice in the vegetation period: at about flowering and in the second half of September. At the first selection time plants are sampled for ELISA.
In the spring of the second year, overwintered canes are checked by woody indexing on 8 indicator species in the field.
In the third and fourth years the nursery is evaluated twice again. At the end, the marked grapevine plants, giving negative results on all indicators in every case, are considered virus-free.
In autumn of the fourth year, the virus-free material is planted out under screenhouse and also in a special mother block (nuclear stock) for maintenance and propagation.
Mother blocks of virus-free scion varieties have been established on 2 ha and those of rootstock varieties on 0.5 ha planted with the following number of varieties included in the national list: 71 European scion — and 12 rootstock varieties or variety candidates/clones. It is necessary to increase the area of Pre-base, Base and Certified stocks exclusively with tested virus-free (clean) material.
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Colour and water content detection of sweet cherry by portable spectrometer
23-26.Views:295Based on the most recent data, the average amount of sweet cherry produced in Hungary is around 10-12 thousand tons. Therefore fast and effective method is important for sweet cherry fruit quality analyses. The aim of the study was to examine the applicability of reflectance measurements for sweet cherry fruit quality analyses. In our experiment five cherry species (Vera, Cristalina, Germersdorfi, Noir de Mechet, Canada Giant) were examined in order to measure the spectral differences between species. Further more, spectral alteration was examined between different health and maturity status of the fruits in the case of a specified, the Germesdorfi species. The four new indices are appropriate tools for cherry quality analysis. Thus reflectance measurements can also support more precise and automated fruit selections. The methods for the differentiation of species could also be viable at a concerned habitat; however, the climate, habitat and soil conditions strongly affect the yield quality. Concerning the fast determination of water content, WBI could be a reliable method for the assessment
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Detection of natural infection of Quercus spp. by the chestnut blight fungus (Cryphonectria parasitica) in Hungary
54-56.Views:178The chestnut blight fungus Cryphonectria parasitica (Murrill) Barr [syn.: Endothia parasitica (Murr) Anderson] caused almost total destruction of the American chestnut (Castanea dentata) and widely spread on European chestnut (Castanea saliva) in many European countries. In Hungary, because this fungus threatens most of the Hungarian chestnut stands, great efforts have been made to delay its spread. Biological control with Hungarian hypovirulent strains of the pathogen seems to be an effective method for saving the affected chestnut trees. Until 1998 the fungus was detected on Castanea saliva only, then on some trees of young Quercus petrea in mixed chestnut forests, which also showed the typical symptoms of blight (Kőszeg and Zengővárkony). Although blight symptoms are not so serious in Quercus spp. than in Castanea spp., it seems that C. parasitica threatens the young Quercus spp. in Hungary, mainly in heavily infected chestnut forests. This is the first report of C. parasitica cankers on oak in Hungary.
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Studies on some seed traits of Iris pumila L., Adonis vernalis L., Primula veris Huds. and Alkanna tinctoria (L.) Tausch.
36-40.Views:125In this study we summarize the results of a five-years period concerning seed traits examinations on Iris pumila, Adonis vernalis, Primula veris and Alkanna tinctoria, with special attention to seed dimensions, seed mass and other traits concerning plant fitness, to their variability and the relationship among them. We found tight correlation between seed weight and seed dimensions in Adonis and Primula, at the same time no correlation exists among the same characters in Alkanna tinctoria. Consequently, the seed weight and seed dimensions can be used as synonyms in the form of „seed size" only after preliminary detection of correlations among them.
The variability of seed traits is higher in natural categories (individuals, morphs) than in seed mass categories as speculative groups. When we need homogeneous plant stand (e.g. for an introduction experiment) it is suggested to use seeds pre-selected in this way. For ex situ conservation, where the central goal is to maintain the genetic variability, seeds originated from different individuals are preferred.
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New evaluation method to detect physiological stress in fruit trees by airborne hyperspectral image spectroscopy
37-40.Views:163Nowadays airborne remote sensing data are increasingly used in precision agriculture. The fast space-time dependent localization of stresses in orchards, which allows for a more efficient application of horticultural technologies, could lead to improved sustainable precise management. The disadvantage of the near field multi and hyper spectroscopy is the spot sample taking, which can apply independently only for experimental survey in plantations. The traditional satellite images is optionally suitable for precision investigation because of the low spectral and ground resolution on field condition. The presented airborne hyperspectral image spectroscopy reduces above mentioned disadvantages and at the same time provides newer analyzing possibility to the user. In this paper we demonstrate the conditions of data base collection and some informative examination possibility. The estimating of the board band vegetation indices calculated from reflectance is well known in practice of the biomass stress examinations. In this method the N-dimension spectral data cube enables to calculate numerous special narrow band indexes and to evaluate maps. This paper aims at investigating the applied hyperspectral analysis for fruit tree stress detection. In our study, hyperspectral data were collected by an AISADUAL hyperspectral image spectroscopy system, with high (0,5-1,5 m) ground resolution. The research focused on determining of leaves condition in different fruit plantations in the peach orchard near Siófok. Moreover the spectral reflectance analyses could provide more information about plant condition due to changes in the absorption of incident light in the visible and near infrared range of the spectrum.