The phenological processes of flower bud development of stone fruits during dormancy are not thoroughly known. The yield of these species, especially of almond, apricot and peach is determined basically by dormancy of flower buds, the survival rate of buds during winter frosts and by their ability to develop normal floral organs in the next spring. After the initiation of floral primordia, flower bud development is taking place in continuous space until blooming, though at different speed characteristic to the species. To study flower bud development during dormancy we applied two alternative methods in different genotypes of almond, apricot and peach: (1) examination of pollen development (microsporogenesis), and (2) the measurement of pistil length. The samples were collected from the central part of Hungary during the dormancy period of 2004/2005. The three fruit species differed significantly in the speed of flower bud development, it was the quickest in almond, followed by apricot and peach. In addition to the species, there were significant differences in the process of microsporogenesis and pistil development between genotypes within species and also between the different types of shoots on which the buds were located. On short shoots buds developed at a higher speed, than on long shoots. Based on our observations, on the short shoots the period of endodormancy was shorter with 5-30 days, according to genotypes, compared to the long shoots. This difference, however, decreased to 2-3 days by the time of blooming.